Article-Journal

Systematic Evaluation of the Viable Microbiome in the Human Oral and Gut Samples with Spike-in Gram+/- Bacteria
PMA (propidium monoazide) is one of the few methods that are compatible with metagenomic sequencing to characterize the live/intact …
Feng Liu, Hui Lu, Biao Dong, Xiaochang Huang, Hongyu Cheng, Ru Qu, Yichen Hu, Luyun Zhong, Zhenni Guo, Yuehua You, Zhenjiang Zech Xu
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Alterations in Gut Microbiota and Metabolites Associated with Altitude-Induced Cardiac Hypertrophy in Rats during Hypobaric Hypoxia Challenge
The gut microbiota is involved in host responses to high altitude. However, the dynamics of intestinal microecology and their …
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Systematic Evaluation of Antimicrobial Food Preservatives on Glucose Metabolism and Gut Microbiota in Healthy Mice
Certain antimicrobial preservatives (APs) have been shown to perturb gut microbiota. So far, it is not yet fully known that whether …
Ping Li, Ming Li, Tao Wu, Ying Song, Yan Li, Xiaochang Huang, Hui Lu, Zhenjiang Zech Xu
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Cancer Type Classification Using Plasma Cell-Free RNAs Derived from Human and Microbes
The utility of cell-free nucleic acids in monitoring cancer has been recognized by both scientists and clinicians. In addition to human …
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Microbial and Nonvolatile Chemical Diversities of Chinese Dark Teas Are Differed by Latitude and Pile Fermentation
Understanding the microbial and chemical diversities, as well as what affects these diversities, is important for modern manufacturing …
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Gut Microbiome-Targeted Modulations Regulate Metabolic Profiles and Alleviate Altitude-Related Cardiac Hypertrophy in Rats
It is well known that humans physiologically or pathologically respond to high altitude, with these responses accompanied by …
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Diurnal and Eating-Associated Microbial Patterns Revealed via High-Frequency Saliva Sampling
The oral microbiome is linked to oral and systemic health, but its fluctuation under frequent daily activities remains elusive. Here, …
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StrainPanDA: Linked Reconstruction of Strain Composition and Gene Content Profiles via Pangenome-Based Decomposition of Metagenomic Data
Microbial strains of variable functional capacities coexist in microbiomes. Current bioinformatics methods of strain analysis cannot …
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Gut Microbiota from Green Tea Polyphenol-Dosed Mice Improves Intestinal Epithelial Homeostasis and Ameliorates Experimental Colitis
Background Alteration of the gut microbiota may contribute to the development of inflammatory bowel disease (IBD). …
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Zebrafish Model for Human Gut Microbiome-Related Studies: Advantages and Limitations
Germ-free models and bacterial transplantation technology facilitate the mechanism study of the host-gut microbe interaction. Among …
Hui Lu, Ping Li, Xiaochang Huang, Charles Hantsing Wang, Ming Li, Zhenjiang Zech Xu
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